TP02G02930.1


Description : Helicase-associated [Interproscan].


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G02930.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
OT_05G03780.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
Sro1131_g244680.1 Contig1944.g16712 Helicase 0.02 OrthoFinder
Sro1733_g294260.1 Contig4341.g32752 Helicase 0.02 OrthoFinder
Sro226_g092060.1 Contig565.g7178 Helicase 0.02 OrthoFinder
Sro575_g169340.1 Contig1981.g16952 Helicase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 552 624
IPR005114 Helicase_assoc 469 535
IPR005114 Helicase_assoc 395 463
No external refs found!