1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP01G11050.1

TP01G11050.1


Description : Mitochondrial substrate/solute carrier [Interproscan].


Gene families : OG_01_0000072 (OrthoFinder) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G11050.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020964.34 tig00020964_g16812.t1 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder
Cre15.g641200 30783756 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder
Cre16.g672650 30778052 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder
Dusal.0936s00004.1 33189605 Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
EOD33418 No alias Mitochondrial uncoupling protein [Ensembl]. 0.01 OrthoFinder
OT_01G03890.1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.01 OrthoFinder
PTI_01G07230.1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
Sro1333_g263680.1 Contig3364.g26367 Putative mitochondrial 2-oxoglutarate/malate carrier protein 0.01 OrthoFinder
Sro2550_g330920.1 Contig634.g7677 Putative mitochondrial 2-oxoglutarate/malate carrier protein 0.02 OrthoFinder
Sro282_g107360.1 Contig1420.g13079 Putative mitochondrial 2-oxoglutarate/malate carrier protein 0.03 OrthoFinder
Sro3881_g351650.1 Contig1687.g15121 Mitochondrial 0.01 OrthoFinder
XM_002502386.1 MICPUN_58429, 58429 Mitochondrial carrier family 0.01 OrthoFinder
lcl|BLLF01000593.1_cds_GFH13271.1_7748 HaLaN_09121, GFH13271 Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20695.1_5190 PRW20695 Mitochondrial substrate carrier 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004448 isocitrate dehydrogenase activity IEP Enrichment
MF GO:0004450 isocitrate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0019236 response to pheromone IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 8 88
IPR018108 Mitochondrial_sb/sol_carrier 97 181
IPR018108 Mitochondrial_sb/sol_carrier 194 276
No external refs found!