1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP01G09980.1

TP01G09980.1


Description : Methyltransferase domain; Zinc finger, CCHC-type [Interproscan].


Gene families : OG_01_0015130 (OrthoFinder) Phylogenetic Tree(s): OG0015130_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G09980.1
Cluster HCCA: Cluster_93


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR025714 Methyltranfer_dom 123 253
IPR001878 Znf_CCHC 347 363
No external refs found!