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  5. TP01G09890.1

TP01G09890.1


Description : Proteasome component (PCI) domain [Interproscan].


Gene families : OG_01_0002568 (OrthoFinder) Phylogenetic Tree(s): OG0002568_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G09890.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000802.46 tig00000802_g4296.t1 No description available 0.07 OrthoFinder
Cpa|evm.model.tig00000802.47 tig00000802_g4296.t1 26S proteasome non-ATPase regulatory subunit 13 homolog... 0.12 OrthoFinder
Cre17.g734516 30782173, RPN9 Protein degradation.26S proteasome.regulatory... 0.19 OrthoFinder
Cz09g13170.t1 No alias Proteasome component (PCI) domain [Interproscan]. 0.1 OrthoFinder
EOD30863 No alias Proteasome component (PCI) domain [Interproscan]. 0.09 OrthoFinder
OT_14G00950.1 No alias Proteasome component (PCI) domain [Interproscan]. 0.02 OrthoFinder
PTI_06G05030.1 No alias Proteasome component (PCI) domain [Interproscan]. 0.23 OrthoFinder
Sro792_g203100.1 Contig385.g5178 ATPase regulatory subunit 13 0.27 OrthoFinder
Transcript_contig_59644 59644 Hypothetical protein 0.02 OrthoFinder
XM_002505509.1 MICPUN_87774, 87774 Proteasome component (PCI) domain [Interproscan]. 0.02 OrthoFinder
XM_003063621.1 MicpuC2_44969, 44969 Proteasome component (PCI) domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59228.1_7066 PRW59228 26S proteasome non-ATPase regulatory subunit 13 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000717 PCI_dom 232 335
No external refs found!