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  5. TP01G06600.1

TP01G06600.1


Description : Vacuolar protein sorting-associated protein 13, second N-terminal domain; Vacuolar protein sorting-associated protein 13, N-terminal domain; Vacuolar protein sorting-associated protein 13, SHR-binding domain; Vacuolar protein sorting-associated protein 13, C-terminal [Interproscan].


Gene families : OG_01_0009032 (OrthoFinder) Phylogenetic Tree(s): OG0009032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G06600.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
PTI_01G11070.1 No alias Vacuolar protein sorting-associated protein 13,... 0.06 OrthoFinder
PTI_01G11080.1 No alias Vacuolar protein sorting-associated protein 13,... 0.03 OrthoFinder
Sro411_g137730.1 Contig243.g2979 Protein sorting-associated protein 13 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR009543 SHR-BD 1893 2188
IPR031646 VPS13_N2 217 492
IPR026854 VPS13-like_N 3 89
IPR031645 VPS13_C 2519 2685
No external refs found!