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Description : UPF0113, PUA domain; UPF0113, pre-PUA domain [Interproscan].
Gene families : OG_01_0003489 (OrthoFinder) Phylogenetic Tree(s): OG0003489_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP01G02280.1 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020684.42 | tig00020684_g12890.t1 | No description available | 0.07 | OrthoFinder | |
| Cre12.g528900 | 30793507 | No description available | 0.04 | OrthoFinder | |
| EOD24610 | No alias | UPF0113, pre-PUA domain; UPF0113, PUA domain [Interproscan]. | 0.04 | OrthoFinder | |
| OT_05G04260.1 | No alias | UPF0113, PUA domain; UPF0113, pre-PUA domain [Interproscan]. | 0.08 | OrthoFinder | |
| PTI_11G02170.1 | No alias | UPF0113, PUA domain; UPF0113, pre-PUA domain [Interproscan]. | 0.12 | OrthoFinder | |
| Sro196_g083640.1 | Contig3206.g25360 | Protein NIP7 homolog | 0.11 | OrthoFinder | |
| XM_002502126.1 | MICPUN_81410, 81410 | PUA like RNA binding protein | 0.07 | OrthoFinder | |
| XM_003057314.1 | MicpuC2_32422, 32422 | UPF0113, PUA domain; UPF0113, pre-PUA domain [Interproscan]. | 0.04 | OrthoFinder | |
| lcl|BLLF01001473.1_cds_GFH19501.1_13978 | HaLaN_16456, GFH19501 | 60S ribosome subunit biogenesis protein NIP7 homolog | 0.02 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61056.1_615 | PRW61056 | 60S ribosome subunit biogenesis NIP7-like protein | 0.02 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8497623.1_6576 | KAA8497623 | 60S ribosome subunit biogenesis protein NIP7-like | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006777 | Mo-molybdopterin cofactor biosynthetic process | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| BP | GO:0019720 | Mo-molybdopterin cofactor metabolic process | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043545 | molybdopterin cofactor metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0051189 | prosthetic group metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| No external refs found! |