1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP01G00280.1

TP01G00280.1


Description : tRNA methyltransferase, Trm1 [Interproscan].


Gene families : OG_01_0002502 (OrthoFinder) Phylogenetic Tree(s): OG0002502_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G00280.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
PTI_24G00880.1 No alias tRNA methyltransferase, Trm1 [Interproscan]. 0.02 OrthoFinder
Sro2_g001870.2 No alias tRNA methyltransferase, Trm1 [Interproscan]. 0.02 OrthoFinder
Vocar.0019s0179.1 32892771 tRNA methyltransferase, Trm1 [Interproscan]. 0.02 OrthoFinder
XM_002506107.1 MICPUN_98316, 98316 tRNA methyltransferase, Trm1 [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58454.1_7789 PRW58454 TRNA (guanine(26)-N(2))-dimethyltransferase 2 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEA Interproscan
BP GO:0008033 tRNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
InterPro domains Description Start Stop
IPR002905 Trm1 6 28
No external refs found!