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  5. TP01G00130.1

TP01G00130.1


Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002875 (OrthoFinder) Phylogenetic Tree(s): OG0002875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G00130.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.5 tig00001339_g8261.t1 Protein degradation.26S proteasome.20S core... 0.11 OrthoFinder
Cre26.g756797 30778304 Protein degradation.26S proteasome.20S core... 0.23 OrthoFinder
Cz09g32010.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
EOD11720 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.12 OrthoFinder
EOD17403 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.12 OrthoFinder
OT_08G04050.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
PTI_00G00010.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.23 OrthoFinder
Sro1228_g254360.1 Contig2695.g21737 Proteasome subunit beta type-1 0.15 OrthoFinder
Sro335_g119990.1 Contig3868.g29756 Proteasome subunit beta type-1 0.26 OrthoFinder
Vocar.0014s0257.1 32888681 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
XM_002501730.1 MICPUN_81202, 81202 Proteasome, subunit alpha/beta [Interproscan]. 0.11 OrthoFinder
XM_003058479.1 MicpuC2_17183, 17183 Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
lcl|BLLF01002663.1_cds_GFH24902.1_19379 HaLaN_22779, GFH24902 Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20914.1_5022 PRW20914 Proteasome subunit beta type-1 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494675.1_3205 KAA8494675 Proteasome subunit beta type-1 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 76 265
No external refs found!