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Aliases : Contig1965.g16828
Description : Leucine Rich Repeat
Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro970_g226320.1 | |
| Cluster | HCCA: Cluster_322 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro100_g051080.1 | Contig63.g513 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1126_g244030.1 | Contig1609.g14564 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro1236_g255140.1 | Contig1374.g12617 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1246_g255760.1 | Contig800.g8973 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro1460_g274600.1 | Contig332.g4412 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro1468_g275210.1 | Contig3834.g29487 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro2000_g310250.1 | Contig1011.g10144 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro2158_g316950.1 | Contig3584.g27689 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro2223_g319710.1 | Contig2179.g18196 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro242_g096620.1 | Contig554.g7080 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro2695_g334880.1 | Contig897.g9508 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro283_g107810.1 | Contig4255.g32212 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro283_g107820.1 | Contig4255.g32213 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro302_g112200.1 | Contig378.g5078 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro32_g020820.1 | Contig3715.g28555 | LRR receptor-like serine threonine-protein kinase At4g08850-like | 0.04 | OrthoFinder | |
| Sro449_g145300.1 | Contig3482.g27000 | STYKc | 0.03 | OrthoFinder | |
| Sro52_g030880.1 | Contig3190.g25171 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro578_g169850.1 | Contig83.g894 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro638_g179650.1 | Contig628.g7628 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro86_g045610.1 | Contig2999.g23839 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro895_g217150.1 | Contig1937.g16657 | Leucine Rich Repeat | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Enrichment |
| MF | GO:0004930 | G protein-coupled receptor activity | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Enrichment |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| MF | GO:0008417 | fucosyltransferase activity | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| MF | GO:0038023 | signaling receptor activity | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| MF | GO:0060089 | molecular transducer activity | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |