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  5. Sro923_g220670.1

Sro923_g220670.1 (Contig4194.g31935)


Aliases : Contig4194.g31935

Description : Acid type B receptor subunit 2


Gene families : OG_01_0000254 (OrthoFinder) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro923_g220670.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Sro1229_g254440.1 Contig3654.g28208 Gamma-aminobutyric acid (GABA) B receptor 0.04 OrthoFinder
Sro1650_g288710.1 Contig3263.g25713 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro177_g077790.1 Contig795.g8905 Gamma-aminobutyric acid (GABA) B receptor 0.06 OrthoFinder
Sro177_g077840.2 No alias GPCR family 3, C-terminal [Interproscan]. 0.04 OrthoFinder
Sro1815_g299430.1 Contig740.g8480 Receptor, ligand binding region; GPCR family 3,... 0.04 OrthoFinder
Sro618_g176200.1 Contig3757.g28813 Gamma-aminobutyric acid (GABA) B receptor 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004930 G protein-coupled receptor activity IEA Interproscan
BP GO:0007186 G protein-coupled receptor signaling pathway IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR017978 GPCR_3_C 377 645
IPR001828 ANF_lig-bd_rcpt 2 278
No external refs found!