1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro91_g047660.1

Sro91_g047660.1 (Contig190.g2217)


Aliases : Contig190.g2217

Description : Protein S9


Gene families : OG_01_0002973 (OrthoFinder) Phylogenetic Tree(s): OG0002973_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro91_g047660.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020912.92 tig00020912_g15860.t1 Protein biosynthesis.organelle translation... 0.01 OrthoFinder
Cre02.g106750 30786243, MRPS9 No description available 0.08 OrthoFinder
CzCPg01180.t1 No alias Ribosomal protein S9 [Interproscan]. 0.01 OrthoFinder
EOD18285 No alias 30S ribosomal protein S9 [Ensembl]. 0.01 OrthoFinder
OT_11G01400.1 No alias Ribosomal protein S9 [Interproscan]. 0.03 OrthoFinder
PTI_02G06850.1 No alias Ribosomal protein S9 [Interproscan]. 0.04 OrthoFinder
TPCG02720.1 No alias Ribosomal protein S9 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_60686 60686 Ribosomal protein S9 [Interproscan]. 0.03 OrthoFinder
Vocar.0052s0021.1 32897662 Ribosomal protein S9 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
CC GO:0000313 organellar ribosome IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005761 mitochondrial ribosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0072546 EMC complex IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 201 321
No external refs found!