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  5. Sro910_g219110.1

Sro910_g219110.1 (Contig1356.g12503)


Aliases : Contig1356.g12503

Description : Protein ClpB


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro910_g219110.1
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000655.28 tig00000655_g2853.t1 External stimuli response.temperature.Hsp... 0.03 OrthoFinder
Cpa|evm.model.tig00001416.4 tig00001416_g8951.t1 External stimuli response.temperature.Hsp... 0.02 OrthoFinder
Cpa|evm.model.tig00001416.7 tig00001416_g8954.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001416.8 tig00001416_g8954.t1 Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz09g12050.t1 No alias Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain;... 0.03 OrthoFinder
OT_07G02070.1 No alias Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain;... 0.03 OrthoFinder
SymbC1.scaffold685.19 685.19 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA... 0.01 OrthoFinder
SymbC1.scaffold73.29 73.29 Clp, N-terminal; Adaptor protein ClpS, core; Clp ATPase,... 0.01 OrthoFinder
TP09G00210.1 No alias ATPase, AAA-type, core; Clp ATPase, C-terminal;... 0.02 OrthoFinder
Vocar.0014s0261.1 32888665 ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp,... 0.02 OrthoFinder
XM_003057844.1 MicpuC2_45481, 45481 ClpA/ClpB, AAA lid domain; Clp, N-terminal; ATPase,... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497588.1_6541 KAA8497588 Chaperone protein ClpB1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0006784 heme A biosynthetic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046160 heme a metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 476 559
IPR003959 ATPase_AAA_core 336 450
IPR003959 ATPase_AAA_core 610 759
IPR004176 Clp_R_dom 195 228
IPR004176 Clp_R_dom 94 145
IPR019489 Clp_ATPase_C 953 1037
No external refs found!