Aliases : Contig309.g4069
Description : Eukaryotic initiation factor 4A-I (Fragment)
Gene families : OG_01_0000727 (OrthoFinder) Phylogenetic Tree(s): OG0000727_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro902_g218180.1 | |
Cluster | HCCA: Cluster_293 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre06.g298650 | 30780155 | Protein biosynthesis.translation initiation.mRNA... | 0.02 | OrthoFinder | |
Cz01g01210.t1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.01 | OrthoFinder | |
Cz09g30170.t1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
Dusal.0006s00020.1 | 33186124 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.05 | OrthoFinder | |
EOD13868 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.01 | OrthoFinder | |
EOD18846 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.13 | OrthoFinder | |
OT_07G03480.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.1 | OrthoFinder | |
PTI_03G02430.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
PTI_03G03250.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.23 | OrthoFinder | |
TP14G00620.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
Transcript_contig_54730 | 54730 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
XM_002499627.1 | MICPUN_106753, 106753 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.04 | OrthoFinder | |
XM_003055217.1 | MicpuC2_31183, 31183 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.05 | OrthoFinder | |
XM_003058105.1 | MicpuC2_49549, 49549 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.2 | OrthoFinder | |
lcl|LHPG02000002.1_cds_PRW60850.1_4302 | PRW60850 | Eukaryotic initiation factor 4A-3 | 0.04 | OrthoFinder | |
lcl|LHPG02000011.1_cds_PRW45619.1_1516 | PRW45619 | Eukaryotic initiation factor 4A-1-like isoform A | 0.02 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8496772.1_501 | KAA8496772 | ATP-dependent RNA helicase DBP5 | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
MF | GO:0003924 | GTPase activity | IEP | Enrichment |
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Enrichment |
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Enrichment |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Enrichment |
MF | GO:0004664 | prephenate dehydratase activity | IEP | Enrichment |
MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Enrichment |
MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
CC | GO:0005737 | cytoplasm | IEP | Enrichment |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Enrichment |
CC | GO:0005840 | ribosome | IEP | Enrichment |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006413 | translational initiation | IEP | Enrichment |
BP | GO:0006417 | regulation of translation | IEP | Enrichment |
BP | GO:0006448 | regulation of translational elongation | IEP | Enrichment |
BP | GO:0006449 | regulation of translational termination | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Enrichment |
BP | GO:0006570 | tyrosine metabolic process | IEP | Enrichment |
BP | GO:0006571 | tyrosine biosynthetic process | IEP | Enrichment |
BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
BP | GO:0008152 | metabolic process | IEP | Enrichment |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Enrichment |
MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Enrichment |
BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Enrichment |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Enrichment |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Enrichment |
BP | GO:0009893 | positive regulation of metabolic process | IEP | Enrichment |
BP | GO:0009987 | cellular process | IEP | Enrichment |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Enrichment |
BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Enrichment |
BP | GO:0010628 | positive regulation of gene expression | IEP | Enrichment |
BP | GO:0015977 | carbon fixation | IEP | Enrichment |
MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
MF | GO:0016829 | lyase activity | IEP | Enrichment |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
CC | GO:0019867 | outer membrane | IEP | Enrichment |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Enrichment |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Enrichment |
MF | GO:0031369 | translation initiation factor binding | IEP | Enrichment |
CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
CC | GO:0031968 | organelle outer membrane | IEP | Enrichment |
BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Enrichment |
BP | GO:0032270 | positive regulation of cellular protein metabolic process | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Enrichment |
BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
MF | GO:0043022 | ribosome binding | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | Enrichment |
BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
BP | GO:0045727 | positive regulation of translation | IEP | Enrichment |
BP | GO:0045901 | positive regulation of translational elongation | IEP | Enrichment |
BP | GO:0045905 | positive regulation of translational termination | IEP | Enrichment |
BP | GO:0048518 | positive regulation of biological process | IEP | Enrichment |
BP | GO:0048522 | positive regulation of cellular process | IEP | Enrichment |
BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | Enrichment |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0051246 | regulation of protein metabolic process | IEP | Enrichment |
BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Enrichment |
BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
CC | GO:0098588 | bounding membrane of organelle | IEP | Enrichment |
CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Enrichment |
BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Enrichment |
No external refs found! |