- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Contig89.g975
Description : Intercellular signal essential for a variety of patterning events during development (By similarity)
Gene families : OG_01_0000220 (OrthoFinder) Phylogenetic Tree(s): OG0000220_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro8_g006620.1 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro10_g008190.1 | Contig1.g43 | ECF subfamily RNA polymerase sigma-24 subunit | 0.03 | OrthoFinder | |
| Sro116_g056940.1 | Contig2228.g18470 | ECF subfamily RNA polymerase sigma-24 subunit | 0.03 | OrthoFinder | |
| Sro212_g088130.1 | Contig3756.g28796 | Signal recognition particle-docking protein FtsY | 0.04 | OrthoFinder | |
| Sro257_g100830.1 | Contig2018.g17262 | Hypothetical protein | 0.07 | OrthoFinder | |
| Sro314_g115070.1 | Contig2448.g20033 | Hypothetical protein | 0.06 | OrthoFinder | |
| Sro314_g115170.1 | Contig2448.g20043 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro379_g130440.1 | Contig3398.g26561 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro391_g133030.1 | Contig2759.g22204 | (Lipo)protein | 0.06 | OrthoFinder | |
| Sro431_g141380.1 | Contig2042.g17541 | Laminin G sub domain 2 | 0.03 | OrthoFinder | |
| Sro8_g006570.1 | Contig89.g970 | Membrane | 0.03 | OrthoFinder | |
| Sro8_g006680.1 | Contig89.g981 | Mucin 5B, oligomeric mucus gel-forming | 0.05 | OrthoFinder | |
| Sro8_g006820.1 | Contig89.g995 | ECF subfamily RNA polymerase sigma-24 subunit | 0.04 | OrthoFinder | |
| Sro8_g006830.1 | Contig89.g996 | Hemolysin-type calcium-binding repeat (2 copies) | 0.07 | OrthoFinder | |
| Sro950_g223790.1 | Contig3704.g28513 | Mycoplasma protein of unknown function, DUF285 | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0003712 | transcription coregulator activity | IEP | Enrichment |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Enrichment |
| MF | GO:0004383 | guanylate cyclase activity | IEP | Enrichment |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Enrichment |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
| MF | GO:0005216 | ion channel activity | IEP | Enrichment |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0006182 | cGMP biosynthetic process | IEP | Enrichment |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Enrichment |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Enrichment |
| MF | GO:0009975 | cyclase activity | IEP | Enrichment |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
| MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Enrichment |
| MF | GO:0022836 | gated channel activity | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| BP | GO:0046068 | cGMP metabolic process | IEP | Enrichment |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0052652 | cyclic purine nucleotide metabolic process | IEP | Enrichment |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |