Aliases : Contig1188.g11247
Description : Fucoxanthin-chlorophyll a-c binding protein
Gene families : OG_01_0000059 (OrthoFinder) Phylogenetic Tree(s): OG0000059_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro871_g213770.1 | |
Cluster | HCCA: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
EOD41827 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
PTI_02G00660.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
SymbC1.scaffold245.22 | 245.22 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
SymbC1.scaffold5622.1 | 5622.1 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
SymbC1.scaffold5657.2 | 5657.2 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
SymbC1.scaffold7493.1 | 7493.1 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
MF | GO:0005215 | transporter activity | IEP | Enrichment |
MF | GO:0005507 | copper ion binding | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
BP | GO:0006310 | DNA recombination | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
BP | GO:0006811 | ion transport | IEP | Enrichment |
BP | GO:0006812 | cation transport | IEP | Enrichment |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
MF | GO:0008131 | primary amine oxidase activity | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Enrichment |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0009308 | amine metabolic process | IEP | Enrichment |
BP | GO:0015074 | DNA integration | IEP | Enrichment |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015696 | ammonium transport | IEP | Enrichment |
CC | GO:0016020 | membrane | IEP | Enrichment |
MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Enrichment |
MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | Enrichment |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
MF | GO:0048038 | quinone binding | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022796 | Chloroa_b-bind | 34 | 177 |
No external refs found! |