1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro865_g212730.1

Sro865_g212730.1 (Contig3005.g23896)


Aliases : Contig3005.g23896

Description : ADP-ribosylation factor


Gene families : OG_01_0000318 (OrthoFinder) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro865_g212730.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000989.8 tig00000989_g6082.t1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder
Cpa|evm.model.tig00020556.31 tig00020556_g10999.t1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder
Dusal.0272s00010.1 33196422 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold2113.2 2113.2 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
Transcript_contig_59329 59329 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 19 179
No external refs found!