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  5. Sro851_g210830.1

Sro851_g210830.1 (Contig461.g6209)


Aliases : Contig461.g6209

Description : Chloroplastic


Gene families : OG_01_0000059 (OrthoFinder) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro851_g210830.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
EOD04043 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD04179 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
EOD06381 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD08888 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD13767 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD29856 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD31146 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD35505 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD38673 No alias Lught harvesting protein [Ensembl]. 0.01 OrthoFinder
PTI_19G02620.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1461.2 1461.2 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold15398.1 15398.1 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1910.8 1910.8 Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold245.22 245.22 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2821.3 2821.3 Chlorophyll A-B binding protein; RNA recognition motif... 0.02 OrthoFinder
SymbC1.scaffold2826.3 2826.3 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold3177.1 3177.1 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold9578.1 9578.1 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP01G10180.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP22G02570.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003994 aconitate hydratase activity IEP Enrichment
MF GO:0004340 glucokinase activity IEP Enrichment
MF GO:0004396 hexokinase activity IEP Enrichment
MF GO:0004448 isocitrate dehydrogenase activity IEP Enrichment
MF GO:0004450 isocitrate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005536 glucose binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 39 191
No external refs found!