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  5. Sro84_g045070.1

Sro84_g045070.1 (Contig220.g2640)


Aliases : Contig220.g2640

Description : 36 and H4 lysine-20 specific


Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro84_g045070.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cre09.g392542 30780316 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder
Cre11.g475950 30775481 Histone-lysine N-methyltransferase ATXR7 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre17.g746247 30782096 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder
Cz02g16090.t1 No alias SET domain [Interproscan]. 0.03 OrthoFinder
Cz03g13010.t1 No alias PWWP domain; SET domain; AWS domain [Interproscan]. 0.02 OrthoFinder
Cz04g17250.t1 No alias AWS domain; SET domain; Zinc finger, CW-type [Interproscan]. 0.04 OrthoFinder
Dusal.1340s00001.1 33194068 SET domain; AWS domain [Interproscan]. 0.02 OrthoFinder
EOD37382 No alias SET domain [Interproscan]. 0.02 OrthoFinder
OT_03G01110.1 No alias High mobility group box domain; Zinc finger, PHD-finger;... 0.03 OrthoFinder
OT_13G03070.1 No alias AWS domain; SET domain [Interproscan]. 0.01 OrthoFinder
OT_14G01610.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
PTI_01G03700.1 No alias SET domain; Zinc finger, PHD-finger; Bromodomain [Interproscan]. 0.03 OrthoFinder
PTI_01G11780.1 No alias SET domain; AWS domain [Interproscan]. 0.04 OrthoFinder
PTI_22G01600.1 No alias SET domain; PWWP domain; Zinc finger, PHD-finger;... 0.05 OrthoFinder
PTI_29G00470.1 No alias Protein kinase domain; SET domain; Cyclin, N-terminal... 0.06 OrthoFinder
TP07G02900.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54729 54729 SET domain; Pre-SET CXC domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_78818 78818 PHD-finger; SAND domain; PHD-zinc-finger like domain... 0.02 OrthoFinder
Vocar.0044s0031.1 32896567 Zinc finger, CW-type; SET domain; AWS domain [Interproscan]. 0.02 OrthoFinder
XM_002502643.1 MICPUN_58938, 58938 Set domain protein 0.02 OrthoFinder
XM_002505429.1 MICPUN_63548, 63548 Set domain protein 0.05 OrthoFinder
XM_003062458.1 MicpuC2_68459, 68459 Set domain protein 0.02 OrthoFinder
XM_003064447.1 MicpuC2_54214, 54214 Set domain protein 0.02 OrthoFinder
lcl|BLLF01000012.1_cds_GFH05882.1_359 HaLaN_00418, GFH05882 Histone-lysine N-methyltransferase 0.01 OrthoFinder
lcl|BLLF01000184.1_cds_GFH08777.1_3254 HaLaN_03798, GFH08777 Histone-lysine N-methyltransferase 0.01 OrthoFinder
lcl|BLLF01002303.1_cds_GFH23571.1_18048 HaLaN_21200, GFH23571 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01002303.1_cds_GFH23572.1_18049 HaLaN_21201, GFH23572 Histone-lysine N-methyltransferase 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60593.1_4707 PRW60593 Histone-lysine N-methyltransferase ASHH2 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57331.1_9054 PRW57331 Microtubule-associated futsch isoform X1 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498254.1_7207 KAA8498254 Histone-lysine N-methyltransferase, H3 lysine-36 and H4... 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495732.1_1730 KAA8495732 Histone-lysine N-methyltransferase, H3 lysine-36 and H4... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR003888 FYrich_N 1659 1709
IPR019787 Znf_PHD-finger 996 1046
IPR000313 PWWP_dom 293 375
IPR001487 Bromodomain 810 891
IPR001214 SET_dom 1935 2045
No external refs found!