Sro84_g044670.1 (Contig220.g2600)


Aliases : Contig220.g2600

Description : Leptomycin B resistance protein pmd1


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro84_g044670.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Dusal.0407s00010.1 33197898 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
PTI_03G01030.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
PTI_07G02520.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
PTI_13G02060.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro1117_g242960.1 Contig1027.g10242 Lactococcin-G-processing and transport ATP-binding protein LagD 0.04 OrthoFinder
SymbC1.scaffold1243.1 1243.1 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
TP03G09080.1 No alias ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
lcl|BLLF01000605.1_cds_GFH13375.1_7852 HaLaN_09249, GFH13375 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 1023 1312
IPR011527 ABC1_TM_dom 61 311
IPR003439 ABC_transporter-like_ATP-bd 451 598
IPR003439 ABC_transporter-like_ATP-bd 734 882
No external refs found!