1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro833_g208600.1

Sro833_g208600.1 (Contig120.g1366)


Aliases : Contig120.g1366

Description : Receptor ionotropic, NMDA 1


Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro833_g208600.1
Cluster HCCA: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
Sro1106_g241960.1 Contig673.g7891 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro2104_g314720.1 Contig873.g9427 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro62_g035340.1 Contig2718.g21915 Ionotropic glutamate receptor [Interproscan]. 0.03 OrthoFinder
Sro87_g045920.1 Contig2014.g17200 Receptor ionotropic, NMDA 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 90 387
IPR001320 Iontro_rcpt 388 497
No external refs found!