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  5. Sro832_g208450.1

Sro832_g208450.1 (Contig3251.g25661)


Aliases : Contig3251.g25661

Description : Calcium-binding EGF domain


Gene families : OG_01_0001882 (OrthoFinder) Phylogenetic Tree(s): OG0001882_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro832_g208450.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Sro145_g067350.1 Contig3646.g28181 Laminin G sub domain 2 0.04 OrthoFinder
Sro145_g067370.2 No alias Hypothetical protein 0.05 OrthoFinder
Sro3357_g347190.1 Contig2626.g21313 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder
Sro47_g027940.1 Contig1172.g11187 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder
Sro500_g155320.1 Contig407.g5541 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!