Sro820_g207210.1 (Contig34.g203)

Aliases : Contig34.g203

Description : Sel1 domain protein repeat-containing protein

Gene families : OG_01_0000179 (OrthoFinder) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro820_g207210.1
Cluster	HCCA: Cluster_276

Target	Alias	Description	ECC score	Gene Family Method
Sro1011_g231050.1	Contig997.g10078	SAM and U-box domain-containing protein 1	0.03	OrthoFinder
Sro1215_g253210.1	Contig2655.g21465	Sel1 domain protein repeat-containing protein	0.03	OrthoFinder
Sro1311_g261780.1	Contig1682.g15105	Sel1 domain protein repeat-containing protein	0.03	OrthoFinder
Sro1438_g272650.1	Contig3435.g26744	Sel1 domain protein repeat-containing protein	0.02	OrthoFinder
Sro1588_g284330.1	Contig4233.g32103	Sel1 domain protein repeat-containing protein	0.03	OrthoFinder
Sro25_g017160.1	Contig1417.g13055	U box domain [Interproscan].	0.03	OrthoFinder
Sro2646_g333590.1	Contig1915.g16544	Sel1 domain protein repeat-containing protein	0.03	OrthoFinder
Sro341_g121570.1	Contig3952.g30289	Sel1 domain protein repeat-containing protein	0.02	OrthoFinder
Sro3_g002900.1	Contig3832.g29475	Sel1 domain protein repeat-containing protein	0.04	OrthoFinder
Sro459_g147320.1	Contig4657.g34672	U box domain [Interproscan].	0.03	OrthoFinder
Sro639_g179810.1	Contig197.g2302	Sel1 domain protein repeat-containing protein	0.04	OrthoFinder
Sro65_g036920.1	Contig155.g1762	Hypothetical protein	0.03	OrthoFinder
Sro65_g036930.1	Contig155.g1763	Sel1 domain protein repeat-containing protein	0.04	OrthoFinder
Sro793_g203310.1	Contig534.g6939	Sel1 domain protein repeat-containing protein	0.05	OrthoFinder
Sro963_g225330.1	Contig3377.g26434	ERAD-associated E3 ubiquitin-protein ligase component	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008234	cysteine-type peptidase activity	IEP	Enrichment
MF	GO:0008289	lipid binding	IEP	Enrichment
MF	GO:0070008	serine-type exopeptidase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006597	Sel1-like	232	261
IPR006597	Sel1-like	157	188
IPR006597	Sel1-like	201	229
IPR003613	Ubox_domain	55	105

External Links

No external refs found!