Sro813_g206240.1 (Contig4011.g30870)

Aliases : Contig4011.g30870

Description : Protein sorting-associated protein 54

Gene families : OG_01_0002044 (OrthoFinder) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro813_g206240.1
Cluster	HCCA: Cluster_317

Target	Alias	Description	ECC score	Gene Family Method	Actions
Dusal.0077s00019.1	33192483	Vacuolar protein sorting-associated protein 54,...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0016482	cytosolic transport	None	Extended
BP	GO:0042147	retrograde transport, endosome to Golgi	IEA	Interproscan
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Enrichment
MF	GO:0000339	RNA cap binding	IEP	Enrichment
MF	GO:0000340	RNA 7-methylguanosine cap binding	IEP	Enrichment
MF	GO:0003729	mRNA binding	IEP	Enrichment
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Enrichment
CC	GO:0005643	nuclear pore	IEP	Enrichment
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Enrichment
BP	GO:0009966	regulation of signal transduction	IEP	Enrichment
BP	GO:0010646	regulation of cell communication	IEP	Enrichment
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Enrichment
BP	GO:0023051	regulation of signaling	IEP	Enrichment
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Enrichment
CC	GO:0031464	Cul4A-RING E3 ubiquitin ligase complex	IEP	Enrichment
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Enrichment
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Enrichment
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Enrichment
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Enrichment
BP	GO:0048583	regulation of response to stimulus	IEP	Enrichment
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Enrichment
MF	GO:0070001	aspartic-type peptidase activity	IEP	Enrichment
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Enrichment
CC	GO:0140535	intracellular protein-containing complex	IEP	Enrichment
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Enrichment
CC	GO:1990234	transferase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR012501	Vps54_C	849	977

External Links

No external refs found!