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  5. Sro793_g203260.1

Sro793_g203260.1 (Contig534.g6934)


Aliases : Contig534.g6934

Description : Sel1 domain protein repeat-containing protein


Gene families : OG_01_0000179 (OrthoFinder) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro793_g203260.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Sro1227_g254310.1 Contig334.g4443 U-box domain-containing protein 0.03 OrthoFinder
Sro1311_g261780.1 Contig1682.g15105 Sel1 domain protein repeat-containing protein 0.08 OrthoFinder
Sro1438_g272650.1 Contig3435.g26744 Sel1 domain protein repeat-containing protein 0.07 OrthoFinder
Sro1588_g284330.1 Contig4233.g32103 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro1883_g303410.1 Contig2852.g22883 U box domain [Interproscan]. 0.03 OrthoFinder
Sro214_g088890.1 Contig282.g3674 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro227_g092440.1 Contig327.g4356 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro256_g100570.1 Contig3587.g27702 Hypothetical protein 0.03 OrthoFinder
Sro25_g017160.1 Contig1417.g13055 U box domain [Interproscan]. 0.04 OrthoFinder
Sro2646_g333590.1 Contig1915.g16544 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro361_g126480.1 Contig1094.g10573 SAM and U-box domain-containing protein 1 0.03 OrthoFinder
Sro3_g002900.1 Contig3832.g29475 Sel1 domain protein repeat-containing protein 0.07 OrthoFinder
Sro4045_g352650.1 Contig2319.g19150 Hypothetical protein 0.03 OrthoFinder
Sro459_g147320.1 Contig4657.g34672 U box domain [Interproscan]. 0.04 OrthoFinder
Sro59_g034410.1 Contig571.g7287 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro639_g179810.1 Contig197.g2302 Sel1 domain protein repeat-containing protein 0.07 OrthoFinder
Sro65_g036930.1 Contig155.g1763 Sel1 domain protein repeat-containing protein 0.07 OrthoFinder
Sro792_g203190.1 Contig385.g5187 Sel1 domain protein repeat-containing protein 0.06 OrthoFinder
Sro793_g203310.1 Contig534.g6939 Sel1 domain protein repeat-containing protein 0.05 OrthoFinder
Sro870_g213590.1 Contig1807.g15929 Sel1 domain protein repeat-containing protein 0.09 OrthoFinder
Sro963_g225240.1 Contig3377.g26425 Sel1 domain protein repeat-containing protein 0.07 OrthoFinder
Sro983_g227810.1 Contig79.g820 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR006597 Sel1-like 200 233
IPR006597 Sel1-like 235 264
IPR006597 Sel1-like 181 192
IPR003613 Ubox_domain 58 108
No external refs found!