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  5. Sro792_g203190.1

Sro792_g203190.1 (Contig385.g5187)


Aliases : Contig385.g5187

Description : Sel1 domain protein repeat-containing protein


Gene families : OG_01_0000179 (OrthoFinder) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro792_g203190.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Sro1011_g230970.1 Contig997.g10070 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro1011_g231050.1 Contig997.g10078 SAM and U-box domain-containing protein 1 0.07 OrthoFinder
Sro1154_g247120.1 Contig2345.g19268 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro1588_g284330.1 Contig4233.g32103 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro256_g100570.1 Contig3587.g27702 Hypothetical protein 0.03 OrthoFinder
Sro25_g017160.1 Contig1417.g13055 U box domain [Interproscan]. 0.03 OrthoFinder
Sro2646_g333570.1 Contig1915.g16542 Putative E3 ubiquitin-protein ligase LIN 0.03 OrthoFinder
Sro341_g121570.1 Contig3952.g30289 Sel1 domain protein repeat-containing protein 0.05 OrthoFinder
Sro793_g203260.1 Contig534.g6934 Sel1 domain protein repeat-containing protein 0.06 OrthoFinder
Sro793_g203310.1 Contig534.g6939 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro963_g225240.1 Contig3377.g26425 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro983_g227810.1 Contig79.g820 Sel1 domain protein repeat-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003796 lysozyme activity IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006597 Sel1-like 230 266
IPR006597 Sel1-like 305 334
IPR003613 Ubox_domain 131 199
No external refs found!