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  5. Sro791_g202900.1

Sro791_g202900.1 (Contig1638.g14756)


Aliases : Contig1638.g14756

Description : Thermosome subunit beta (Fragment)


Gene families : OG_01_0002263 (OrthoFinder) Phylogenetic Tree(s): OG0002263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro791_g202900.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000789.37 tig00000789_g4131.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder
Cre09.g397200 30780237, CCT6 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.12 OrthoFinder
Cz02g02210.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
Dusal.0445s00015.1 33197999 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
EOD39434 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.08 OrthoFinder
OT_13G02270.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.09 OrthoFinder
PTI_19G00150.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
Transcript_contig_53955 53955 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Vocar.0008s0243.1 32897465 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
XM_002503159.1 MICPUN_94492, 94492 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.09 OrthoFinder
XM_003061179.1 MicpuC2_34990, 34990 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
lcl|BLLF01002792.1_cds_GFH25355.1_19832 HaLaN_23300, GFH25355 Chaperonin complex component 0.07 OrthoFinder
lcl|BLLF01002792.1_cds_GFH25356.1_19833 HaLaN_23301, GFH25356 T-complex 1 subunit zeta 0.07 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50899.1_999 PRW50899 TCP-1 cpn60 chaperonin family 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498648.1_7601 KAA8498648 T-complex protein 1 subunit zeta 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 33 561
No external refs found!