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  5. Sro787_g202390.1

Sro787_g202390.1 (Contig4626.g34524)


Aliases : Contig4626.g34524

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro787_g202390.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Sro10_g008370.1 Contig1.g61 Leucine rich repeat 0.03 OrthoFinder
Sro1331_g263510.1 Contig1733.g15457 Leucine rich repeat N-terminal domain 0.05 OrthoFinder
Sro1460_g274600.1 Contig332.g4412 Leucine Rich Repeat 0.02 OrthoFinder
Sro1543_g281120.1 Contig1530.g13908 Hypothetical protein 0.03 OrthoFinder
Sro1685_g291070.1 Contig3608.g27874 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro2158_g316930.1 Contig3584.g27687 Leucine Rich Repeat 0.03 OrthoFinder
Sro2158_g316940.1 Contig3584.g27688 Leucine Rich Repeat 0.04 OrthoFinder
Sro242_g096620.1 Contig554.g7080 Leucine Rich Repeat 0.03 OrthoFinder
Sro283_g107800.1 Contig4255.g32211 Leucine Rich Repeat 0.04 OrthoFinder
Sro3045_g342740.1 Contig2560.g20802 Leucine Rich Repeat 0.03 OrthoFinder
Sro32_g020780.1 Contig3715.g28551 Leucine Rich Repeat 0.04 OrthoFinder
Sro32_g020790.1 Contig3715.g28552 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.03 OrthoFinder
Sro449_g145320.1 Contig3482.g27002 Leucine Rich Repeat 0.05 OrthoFinder
Sro45_g026870.1 Contig2311.g19069 Leucine Rich Repeat 0.06 OrthoFinder
Sro460_g147480.1 Contig3843.g29573 Leucine Rich Repeat 0.03 OrthoFinder
Sro469_g149290.1 Contig2361.g19379 Leucine Rich Repeat 0.04 OrthoFinder
Sro52_g030940.1 Contig3190.g25177 Leucine Rich Repeat 0.03 OrthoFinder
Sro52_g031230.1 Contig3190.g25206 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro548_g164490.1 Contig1714.g15329 LRR receptor-like serine threonine-protein kinase 0.05 OrthoFinder
Sro558_g166260.1 Contig3624.g28024 Leucine Rich Repeat 0.03 OrthoFinder
Sro573_g168940.1 Contig1565.g14208 Fibronectin leucine rich transmembrane protein 2 0.02 OrthoFinder
Sro638_g179650.1 Contig628.g7628 Leucine Rich Repeat 0.02 OrthoFinder
Sro73_g040430.1 Contig3929.g30144 Leucine Rich Repeat 0.06 OrthoFinder
Sro74_g040710.1 Contig4700.g34933 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!