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  5. Sro785_g202150.1

Sro785_g202150.1 (Contig2407.g19693)


Aliases : Contig2407.g19693

Description : Glutamate synthase 1 [NADH], chloroplastic


Gene families : OG_01_0000413 (OrthoFinder) Phylogenetic Tree(s): OG0000413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro785_g202150.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cre12.g514050 30792611, GSF1 Nutrient uptake.nitrogen assimilation.ammonium... 0.05 OrthoFinder
Dusal.0052s00003.1 33199570 Glutamine amidotransferase type 2 domain; Glutamate... 0.02 OrthoFinder
Dusal.0806s00001.1 33190345 Glutamate synthase, central-N; Glutamine... 0.04 OrthoFinder
EOD23577 No alias Dihydroprymidine dehydrogenase domain II;... 0.02 OrthoFinder
EOD37258 No alias Glutamine amidotransferase type 2 domain; Glutamate... 0.02 OrthoFinder
PTI_08G03700.1 No alias Dihydroprymidine dehydrogenase domain II;... 0.04 OrthoFinder
SymbC1.scaffold1423.11 1423.11 FAD/NAD(P)-binding domain; Dihydroprymidine... 0.01 OrthoFinder
SymbC1.scaffold588.8 588.8 Glutamate synthase, alpha subunit, C-terminal;... 0.01 OrthoFinder
TP06G05930.1 No alias Dihydroprymidine dehydrogenase domain II;... 0.05 OrthoFinder
TP13G02310.1 No alias Glutamate synthase, alpha subunit, C-terminal; Glutamate... 0.05 OrthoFinder
Transcript_contig_54079 54079 Glutamate synthase, alpha subunit, C-terminal; Glutamate... 0.03 OrthoFinder
Transcript_contig_79066 79066 Glutamate synthase, central-N; Glutamine... 0.03 OrthoFinder
Vocar.0064s0005.1 32897716 Glutamate synthase, central-N; Dihydroprymidine... 0.02 OrthoFinder
lcl|BLLF01001038.1_cds_GFH16698.1_11175 HaLaN_13171, GFH16698 Glutamate synthetase 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60858.1_4601 PRW60858 Glutamate synthase 1 [NADH] chloroplastic isoform X1 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006537 glutamate biosynthetic process IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
MF GO:0015930 glutamate synthase activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002489 Glu_synth_asu_C 1343 1532
IPR017932 GATase_2_dom 80 506
IPR006982 Glu_synth_centr_N 536 834
IPR002932 Glu_synthdom 905 1261
No external refs found!