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  5. Sro774_g200710.1

Sro774_g200710.1 (Contig845.g9315)


Aliases : Contig845.g9315

Description : DNA polymerase lambda


Gene families : OG_01_0002132 (OrthoFinder) Phylogenetic Tree(s): OG0002132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro774_g200710.1
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000012.1_cds_KAA8491707.1_5175 KAA8491707 DNA polymerase lambda 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0034061 DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR010996 DNA_pol_b-like_N 188 256
IPR028207 DNA_pol_B_palm_palm 334 475
IPR029398 PolB_thumb 482 551
IPR018944 DNA_pol_lambd_fingers_domain 279 330
No external refs found!