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  5. Sro758_g198040.1

Sro758_g198040.1 (Contig434.g5856)


Aliases : Contig434.g5856

Description : Zinc metalloprotease FTSH, chloroplastic


Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro758_g198040.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.23 tig00000704_g3313.t1 ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00021127.121 tig00021127_g18802.t1 ATP-dependent zinc metalloprotease FTSH 5, chloroplastic... 0.04 OrthoFinder
Cre09.g393950 30780473 Probable inactive ATP-dependent zinc metalloprotease... 0.04 OrthoFinder
Cre12.g485800 30791981, FHL1 Protein degradation.peptidase families.metallopeptidase... 0.06 OrthoFinder
Cre17.g720050 30782442, FHL2 Protein degradation.peptidase families.metallopeptidase... 0.07 OrthoFinder
Cz02g25060.t1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.07 OrthoFinder
Cz03g27160.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.07 OrthoFinder
Cz05g33210.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
Dusal.0121s00013.1 33195080 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.01 OrthoFinder
Dusal.1123s00001.1 33193861 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.01 OrthoFinder
EOD07483 No alias ATP-dependent metalloprotease FtsH [Ensembl]. 0.06 OrthoFinder
EOD15728 No alias ATP-dependent metalloprotease FtsH [Ensembl]. 0.09 OrthoFinder
OT_09G02830.1 No alias Peptidase M41 [Interproscan]. 0.01 OrthoFinder
PTI_01G04910.1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.03 OrthoFinder
Vocar.0004s0172.1 32889955 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.04 OrthoFinder
Vocar.0013s0271.1 32896473 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.01 OrthoFinder
Vocar.0016s0146.1 32898067 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.02 OrthoFinder
Vocar.0028s0163.1 32895585 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
XM_002503506.1 MICPUN_59979, 59979 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.02 OrthoFinder
XM_002505949.1 MICPUN_106506, 106506 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.01 OrthoFinder
XM_003055534.1 MicpuC2_24317, 24317 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.02 OrthoFinder
XM_003057108.1 MicpuC2_55999, 55999 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
lcl|BLLF01000045.1_cds_GFH06562.1_1039 HaLaN_01213, GFH06562 Membrane AAA-metalloprotease 0.02 OrthoFinder
lcl|BLLF01002869.1_cds_GFH25630.1_20107 HaLaN_23625, GFH25630 Extracellular protease 0.01 OrthoFinder
lcl|BLLF01003298.1_cds_GFH26952.1_21429 HaLaN_25189, GFH26952 AAA domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60287.1_4164 PRW60287 Cell division isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 452 642
IPR003959 ATPase_AAA_core 234 366
IPR041569 AAA_lid_3 389 427
No external refs found!