1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro753_g197340.2

Sro753_g197340.2


Description : SET domain [Interproscan].


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro753_g197340.2
Cluster HCCA: Cluster_282

Target Alias Description ECC score Gene Family Method Actions
EOD27982 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Sro574_g169230.1 Contig281.g3642 SET and MYND domain-containing protein DDB 0.04 OrthoFinder
Sro753_g197340.1 Contig4403.g33077 Histone-lysine N-methyltransferase 0.03 OrthoFinder
SymbC1.scaffold1733.8 1733.8 SET domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2460.2 2460.2 SET domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold7644.2 7644.2 Hypothetical protein 0.02 OrthoFinder
Vocar.0002s0277.1 32891028 Zinc finger, MYND-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 101 476
No external refs found!