Sro728_g193740.1 (Contig1495.g13658)


Aliases : Contig1495.g13658

Description : Hybrid signal transduction histidine kinase


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro728_g193740.1
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000325.13 tig00000325_g24095.t1 Ethylene receptor 2 OS=Solanum lycopersicum 0.01 OrthoFinder
Cpa|evm.model.tig00020710.84 tig00020710_g13337.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cre11.g469400 30775874 No description available 0.03 OrthoFinder
Sro14_g010640.1 Contig1128.g10813 Respiration control sensor protein ArcB 0.03 OrthoFinder
Sro2226_g319830.1 Contig2376.g19526 Osmosensing histidine protein kinase SLN1 0.03 OrthoFinder
Sro287_g108630.1 Contig252.g3104 Sensor protein kinase WalK (Fragment) 0.06 OrthoFinder
Sro33_g021480.1 Contig2613.g21169 Sensor kinase/phosphatase LuxQ 0.04 OrthoFinder
Sro351_g124000.1 Contig4381.g32954 Respiration control sensor protein ArcB 0.02 OrthoFinder
Sro369_g128120.1 Contig1690.g15135 Hybrid signal transduction histidine kinase J 0.03 OrthoFinder
Sro431_g141430.1 Contig2042.g17546 Histidine kinase 0.05 OrthoFinder
Sro548_g164350.1 Contig1714.g15315 Sensor protein kinase WalK (Fragment) 0.03 OrthoFinder
Sro636_g179300.1 Contig84.g907 Sensor kinase/phosphatase LuxQ 0.04 OrthoFinder
lcl|BLLF01001045.1_cds_GFH16747.1_11224 HaLaN_13231, GFH16747 Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
lcl|BLLF01001425.1_cds_GFH19214.1_13691 HaLaN_16126, GFH19214 Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003661 HisK_dim/P 410 474
IPR001789 Sig_transdc_resp-reg_receiver 727 790
IPR003594 HATPase_C 521 664
No external refs found!