Sro728_g193740.1 (Contig1495.g13658)

Aliases : Contig1495.g13658

Description : Hybrid signal transduction histidine kinase

Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro728_g193740.1
Cluster	HCCA: Cluster_262

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000325.13	tig00000325_g24095.t1	Ethylene receptor 2 OS=Solanum lycopersicum	0.01	OrthoFinder
Cpa\|evm.model.tig00020710.84	tig00020710_g13337.t1	Probable histidine kinase 4 OS=Oryza sativa subsp. japonica	0.02	OrthoFinder
Cre11.g469400	30775874	No description available	0.03	OrthoFinder
Sro14_g010640.1	Contig1128.g10813	Respiration control sensor protein ArcB	0.03	OrthoFinder
Sro2226_g319830.1	Contig2376.g19526	Osmosensing histidine protein kinase SLN1	0.03	OrthoFinder
Sro287_g108630.1	Contig252.g3104	Sensor protein kinase WalK (Fragment)	0.06	OrthoFinder
Sro33_g021480.1	Contig2613.g21169	Sensor kinase/phosphatase LuxQ	0.04	OrthoFinder
Sro351_g124000.1	Contig4381.g32954	Respiration control sensor protein ArcB	0.02	OrthoFinder
Sro369_g128120.1	Contig1690.g15135	Hybrid signal transduction histidine kinase J	0.03	OrthoFinder
Sro431_g141430.1	Contig2042.g17546	Histidine kinase	0.05	OrthoFinder
Sro548_g164350.1	Contig1714.g15315	Sensor protein kinase WalK (Fragment)	0.03	OrthoFinder
Sro636_g179300.1	Contig84.g907	Sensor kinase/phosphatase LuxQ	0.04	OrthoFinder
lcl\|BLLF01001045.1_cds_GFH16747.1_11224	HaLaN_13231, GFH16747	Signal transduction response regulator, receiver domain...	0.01	OrthoFinder
lcl\|BLLF01001425.1_cds_GFH19214.1_13691	HaLaN_16126, GFH19214	Signal transduction histidine kinase,...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003661	HisK_dim/P	410	474
IPR001789	Sig_transdc_resp-reg_receiver	727	790
IPR003594	HATPase_C	521	664

External Links

No external refs found!