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  5. Sro701_g189780.1

Sro701_g189780.1 (Contig2013.g17189)


Aliases : Contig2013.g17189

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000437 (OrthoFinder) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro701_g189780.1
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
Sro1775_g296890.1 Contig695.g8119 CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder
Sro735_g194810.1 Contig2764.g22253 CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder
Sro769_g199830.1 Contig2367.g19485 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 127 231
No external refs found!