1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro662_g183400.1

Sro662_g183400.1 (Contig3613.g27934)


Aliases : Contig3613.g27934

Description : Receptor-type guanylate cyclase gcy


Gene families : OG_01_0000012 (OrthoFinder) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro662_g183400.1
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.7 tig00000402_g182.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000984.21 tig00000984_g5996.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00001187.22 tig00001187_g7471.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001264.21 tig00001264_g7877.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00020562.47 tig00020562_g11174.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00020616.44 tig00020616_g12280.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020892.13 tig00020892_g14915.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020903.54 tig00020903_g15123.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021374.10 tig00021374_g21093.t1 No description available 0.01 OrthoFinder
Cre01.g015200 30789453, PDE4 No description available 0.01 OrthoFinder
Cre02.g119850 30785651, PDE9 No description available 0.02 OrthoFinder
Cre10.g454900 30790517 No description available 0.02 OrthoFinder
Cre12.g499300 30792723 No description available 0.02 OrthoFinder
Cre12.g557500 30792976 No description available 0.02 OrthoFinder
Cre13.g590600 30784358 No description available 0.01 OrthoFinder
Cre14.g617700 30776370, PDE2 No description available 0.01 OrthoFinder
Cre16.g664200 30778171 No description available 0.01 OrthoFinder
Sro1817_g299530.1 Contig1204.g11340 Natriuretic peptide receptor 2 0.04 OrthoFinder
Sro27_g018150.1 Contig3926.g30076 Receptor-type guanylate cyclase gcy 0.03 OrthoFinder
Sro38_g023580.1 Contig1551.g14093 Affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic... 0.03 OrthoFinder
lcl|BLLF01000539.1_cds_GFH12783.1_7260 HaLaN_08533, GFH12783 Phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01000540.1_cds_GFH12791.1_7268 HaLaN_08543, GFH12791 Phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01000743.1_cds_GFH14576.1_9053 HaLaN_10659, GFH14576 3'5'-cyclic nucleotide phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01001596.1_cds_GFH20210.1_14687 HaLaN_17293, GFH20210 3',5'-cyclic-nucleotide phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01001709.1_cds_GFH20844.1_15321 HaLaN_18036, GFH20844 3'5'-cyclic nucleotide phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01001772.1_cds_GFH21165.1_15642 HaLaN_18410, GFH21165 Phosphodiesterase 0.02 OrthoFinder
lcl|BLLF01002075.1_cds_GFH22595.1_17072 HaLaN_20084, GFH22595 3'5'-cyclic nucleotide phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01002475.1_cds_GFH24218.1_18695 HaLaN_21966, GFH24218 Phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01002616.1_cds_GFH24725.1_19202 HaLaN_22575, GFH24725 Phosphodiesterase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
BP GO:0009190 cyclic nucleotide biosynthetic process IEA Interproscan
BP GO:0035556 intracellular signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR002073 PDEase_catalytic_dom 1045 1303
IPR001054 A/G_cyclase 715 898
No external refs found!