1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro636_g179220.1

Sro636_g179220.1 (Contig84.g899)


Aliases : Contig84.g899

Description : Hypothetical protein


Gene families : OG_01_0000045 (OrthoFinder) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro636_g179220.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Sro1283_g259110.1 Contig1308.g12124 Hypothetical protein 0.01 OrthoFinder
Sro12_g009300.1 Contig2293.g18950 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro130_g062140.1 Contig2611.g21137 Hypothetical protein 0.07 OrthoFinder
Sro140_g065590.1 Contig1537.g13975 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro178_g078110.1 Contig275.g3536 Hypothetical protein 0.02 OrthoFinder
Sro232_g093920.1 Contig4063.g31157 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro2649_g333680.1 Contig397.g5371 Hypothetical protein 0.04 OrthoFinder
Sro540_g162940.1 Contig4704.g34983 Hypothetical protein 0.01 OrthoFinder
Sro813_g206100.1 Contig4011.g30856 CRAL-TRIO lipid binding domain [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment

No InterPro domains available for this sequence

No external refs found!