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  5. Sro610_g175190.1

Sro610_g175190.1 (Contig255.g3145)


Aliases : Contig255.g3145

Description : Nuclear autoantigen Sp-100 (Fragment)


Gene families : OG_01_0000118 (OrthoFinder) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro610_g175190.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001234.9 tig00001234_g7731.t1 No description available 0.02 OrthoFinder
Cre06.g261450 30780082 No description available 0.02 OrthoFinder
Cre11.g481050 30775467 FACT complex subunit SSRP1 OS=Arabidopsis thaliana 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59222.1_6870 PRW59222 High mobility group 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 49 115
IPR009071 HMG_box_dom 132 199
No external refs found!