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Aliases : Contig2039.g17523
Description : Deoxyribodipyrimidine photo-lyase
Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro580_g170080.1 | |
| Cluster | HCCA: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000391.2 | tig00000391_g24833.t1 | DNA damage response.DNA repair... | 0.04 | OrthoFinder | |
| Cpa|evm.model.tig00020965.69 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.06 | OrthoFinder | |
| Cpa|evm.model.tig00020965.70 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.07 | OrthoFinder | |
| Cpa|evm.model.tig00021012.26 | tig00021012_g17007.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.03 | OrthoFinder | |
| Cpa|evm.model.tig00021579.19 | tig00021579_g22443.t1 | Cryptochrome-1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cre02.g078939 | 30785814 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.04 | OrthoFinder | |
| Cz04g35200.t1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.03 | OrthoFinder | |
| Cz04g36010.t1 | No alias | DNA photolyase, N-terminal [Interproscan]. | 0.02 | OrthoFinder | |
| Cz09g17160.t1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.03 | OrthoFinder | |
| Dusal.0203s00017.1 | 33199258 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| EOD04007 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| EOD11134 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.05 | OrthoFinder | |
| EOD15451 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.05 | OrthoFinder | |
| EOD19626 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.03 | OrthoFinder | |
| EOD24687 | No alias | Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. | 0.04 | OrthoFinder | |
| EOD31738 | No alias | Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. | 0.02 | OrthoFinder | |
| OT_15G01070.1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.03 | OrthoFinder | |
| PTI_05G04390.1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.05 | OrthoFinder | |
| PTI_06G00880.1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| PTI_08G03200.1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.03 | OrthoFinder | |
| PTI_24G00100.1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| Transcript_contig_56266 | 56266 | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.04 | OrthoFinder | |
| Transcript_contig_7429 | 7429 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0001s0913.1 | 32884261 | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.02 | OrthoFinder | |
| Vocar.0002s0198.1 | 32890551 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
| XM_002508739.1 | MICPUN_61974, 61974 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.05 | OrthoFinder | |
| XM_003057723.1 | MicpuC2_16082, 16082 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| XM_003061182.1 | MicpuC2_19486, 19486 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.03 | OrthoFinder | |
| XM_003062934.1 | MicpuC2_22169, 22169 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| lcl|BLLF01000049.1_cds_GFH06657.1_1134 | HaLaN_01325, GFH06657 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.01 | OrthoFinder | |
| lcl|BLLF01001067.1_cds_GFH16890.1_11367 | HaLaN_13407, GFH16890 | Deoxyribodipyrimidine photo-lyase | 0.01 | OrthoFinder | |
| lcl|BLLF01001533.1_cds_GFH19868.1_14345 | HaLaN_16893, GFH19868 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.02 | OrthoFinder | |
| lcl|BLLF01001533.1_cds_GFH19869.1_14346 | HaLaN_16894, GFH19869 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.02 | OrthoFinder | |
| lcl|VRMN01000002.1_cds_KAA8496724.1_453 | KAA8496724 | Deoxyribodipyrimidine photo-lyase | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004518 | nuclease activity | IEP | Enrichment |
| MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | Enrichment |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016851 | magnesium chelatase activity | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | Enrichment |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| No external refs found! |