1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro560_g166650.1

Sro560_g166650.1 (Contig2779.g22380)


Aliases : Contig2779.g22380

Description : Canonical poly(A) RNA polymerase PAPD7


Gene families : OG_01_0000397 (OrthoFinder) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro560_g166650.1
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_57056 57056 Polymerase, nucleotidyl transferase domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000006.1_cds_GFH05714.1_191 HaLaN_00217, GFH05714 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000770.1_cds_GFH14814.1_9291 HaLaN_10935, GFH14814 Poly(A) polymerase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR002058 PAP_assoc 349 407
IPR002934 Polymerase_NTP_transf_dom 115 161
No external refs found!