1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro55_g032300.1

Sro55_g032300.1 (Contig4458.g33504)


Aliases : Contig4458.g33504

Description : Ankyrin repeat protein


Gene families : OG_01_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro55_g032300.1
Cluster HCCA: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
Sro1103_g241700.1 Contig4430.g33247 Ankyrin repeat protein 0.03 OrthoFinder
Sro2018_g311240.1 Contig4652.g34631 Ankyrin repeat protein 0.05 OrthoFinder
Sro2173_g317620.1 Contig2757.g22201 Ankyrin repeat protein 0.04 OrthoFinder
Sro218_g089980.1 Contig1136.g10899 Ankyrin repeat protein 0.02 OrthoFinder
Sro2890_g339570.1 Contig1304.g12101 Ankyrin repeat protein 0.05 OrthoFinder
Sro55_g032220.1 Contig4458.g33496 Ankyrin repeat protein 0.02 OrthoFinder
Sro57_g033400.1 Contig284.g3708 Hypothetical protein 0.02 OrthoFinder
Sro72_g039800.1 Contig1459.g13379 Ankyrin containing protein (ISS) 0.02 OrthoFinder
Sro790_g202870.1 Contig4757.g458 Ankyrin repeat protein 0.03 OrthoFinder
Sro932_g221650.1 Contig2857.g22908 Ankyrin repeat protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!