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Aliases : Contig3190.g25197
Description : Leucine Rich Repeat
Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro52_g031140.1 | |
| Cluster | HCCA: Cluster_256 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro100_g051080.1 | Contig63.g513 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro101_g051720.1 | Contig348.g4725 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro10_g008370.1 | Contig1.g61 | Leucine rich repeat | 0.06 | OrthoFinder | |
| Sro111_g055190.1 | Contig567.g7196 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro1331_g263500.1 | Contig1733.g15456 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro1331_g263510.1 | Contig1733.g15457 | Leucine rich repeat N-terminal domain | 0.04 | OrthoFinder | |
| Sro1449_g273620.1 | Contig2836.g22752 | Leucine rich repeat | 0.04 | OrthoFinder | |
| Sro1543_g281110.1 | Contig1530.g13907 | Leucine Rich Repeat | 0.06 | OrthoFinder | |
| Sro1543_g281120.1 | Contig1530.g13908 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro1685_g291070.1 | Contig3608.g27874 | LRR receptor-like serine threonine-protein kinase | 0.02 | OrthoFinder | |
| Sro1781_g297090.1 | Contig230.g2769 | Receptor-like protein kinase precursor | 0.03 | OrthoFinder | |
| Sro2158_g316940.1 | Contig3584.g27688 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro242_g096620.1 | Contig554.g7080 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro265_g102830.1 | Contig1806.g15913 | Leucine rich repeat | 0.03 | OrthoFinder | |
| Sro283_g107800.1 | Contig4255.g32211 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro283_g107820.1 | Contig4255.g32213 | LRR receptor-like serine threonine-protein kinase | 0.02 | OrthoFinder | |
| Sro302_g112200.1 | Contig378.g5078 | LRR receptor-like serine threonine-protein kinase | 0.05 | OrthoFinder | |
| Sro3045_g342740.1 | Contig2560.g20802 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro321_g116720.1 | Contig56.g428 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro322_g117050.1 | Contig1229.g11543 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro32_g020790.1 | Contig3715.g28552 | LRR receptor-like serine threonine-protein kinase At4g08850-like | 0.03 | OrthoFinder | |
| Sro4136_g353110.1 | Contig3023.g24105 | LRR receptor-like serine threonine-protein kinase | 0.05 | OrthoFinder | |
| Sro449_g145300.1 | Contig3482.g27000 | STYKc | 0.02 | OrthoFinder | |
| Sro449_g145320.1 | Contig3482.g27002 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro449_g145340.1 | Contig3482.g27004 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro449_g145350.1 | Contig3482.g27005 | Leucine rich repeat | 0.03 | OrthoFinder | |
| Sro45_g026870.1 | Contig2311.g19069 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro460_g147480.1 | Contig3843.g29573 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro469_g149290.1 | Contig2361.g19379 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro52_g030870.1 | Contig3190.g25170 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro52_g030940.1 | Contig3190.g25177 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro52_g031230.1 | Contig3190.g25206 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro558_g166260.1 | Contig3624.g28024 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro73_g040430.1 | Contig3929.g30144 | Leucine Rich Repeat | 0.06 | OrthoFinder | |
| Sro755_g197630.1 | Contig3465.g26898 | Leucine Rich Repeat | 0.01 | OrthoFinder | |
| Sro837_g209160.1 | Contig405.g5509 | Leucine Rich Repeat | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |