Sro52_g030970.1 (Contig3190.g25180)


Aliases : Contig3190.g25180

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro52_g030970.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Sro1236_g255140.1 Contig1374.g12617 Leucine Rich Repeat 0.03 OrthoFinder
Sro1331_g263500.1 Contig1733.g15456 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro1331_g263510.1 Contig1733.g15457 Leucine rich repeat N-terminal domain 0.05 OrthoFinder
Sro1460_g274600.1 Contig332.g4412 Leucine Rich Repeat 0.02 OrthoFinder
Sro1468_g275160.1 Contig3834.g29482 Leucine Rich Repeat 0.05 OrthoFinder
Sro1468_g275210.1 Contig3834.g29487 Leucine Rich Repeat 0.05 OrthoFinder
Sro1543_g281110.1 Contig1530.g13907 Leucine Rich Repeat 0.06 OrthoFinder
Sro1543_g281120.1 Contig1530.g13908 Hypothetical protein 0.04 OrthoFinder
Sro1781_g297090.1 Contig230.g2769 Receptor-like protein kinase precursor 0.03 OrthoFinder
Sro283_g107800.1 Contig4255.g32211 Leucine Rich Repeat 0.07 OrthoFinder
Sro321_g116720.1 Contig56.g428 Leucine Rich Repeat 0.05 OrthoFinder
Sro322_g117050.1 Contig1229.g11543 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro4136_g353110.1 Contig3023.g24105 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro449_g145320.1 Contig3482.g27002 Leucine Rich Repeat 0.04 OrthoFinder
Sro449_g145350.1 Contig3482.g27005 Leucine rich repeat 0.03 OrthoFinder
Sro45_g026870.1 Contig2311.g19069 Leucine Rich Repeat 0.05 OrthoFinder
Sro469_g149290.1 Contig2361.g19379 Leucine Rich Repeat 0.05 OrthoFinder
Sro52_g030920.1 Contig3190.g25175 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro52_g030940.1 Contig3190.g25177 Leucine Rich Repeat 0.05 OrthoFinder
Sro548_g164490.1 Contig1714.g15329 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro638_g179650.1 Contig628.g7628 Leucine Rich Repeat 0.02 OrthoFinder
Sro73_g040430.1 Contig3929.g30144 Leucine Rich Repeat 0.04 OrthoFinder
Sro74_g040710.1 Contig4700.g34933 Leucine Rich Repeat 0.04 OrthoFinder
Sro755_g197630.1 Contig3465.g26898 Leucine Rich Repeat 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!