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  5. Sro519_g158940.1

Sro519_g158940.1 (Contig1321.g12211)


Aliases : Contig1321.g12211

Description : Leucine Rich Repeat


Gene families : OG_01_0000352 (OrthoFinder) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro519_g158940.1
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Sro106_g053560.1 Contig1122.g10753 Receptor-like protein kinase 0.04 OrthoFinder
Sro126_g060410.1 Contig82.g858 Receptor-like protein kinase 0.04 OrthoFinder
Sro166_g074290.1 Contig1709.g15308 Leucine Rich Repeat 0.05 OrthoFinder
Sro1772_g296700.1 Contig4653.g34637 Leucine Rich Repeat 0.02 OrthoFinder
Sro202_g085450.1 Contig1673.g15052 Leucine Rich Repeat 0.03 OrthoFinder
Sro308_g113540.1 Contig2352.g19324 Leucine rich repeat N-terminal domain 0.04 OrthoFinder
Sro308_g113630.1 Contig2352.g19333 LRR receptor-like serine threonine-protein kinase 0.05 OrthoFinder
Sro425_g140150.1 Contig3537.g27360 Leucine Rich Repeat 0.04 OrthoFinder
Sro45_g026850.1 Contig2311.g19067 LRR receptor-like serine threonine-protein kinase 0.05 OrthoFinder
Sro45_g027150.1 Contig2311.g19097 Leucine Rich Repeat 0.03 OrthoFinder
Sro471_g149610.1 Contig458.g6174 Receptor-like protein kinase 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!