Sro4_g003570.1 (Contig3815.g29275)

Aliases : Contig3815.g29275

Description : M(4)X modification enzyme TRM13 homolog

Gene families : OG_01_0002839 (OrthoFinder) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro4_g003570.1
Cluster	HCCA: Cluster_193

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0016579	protein deubiquitination	IEP	Enrichment
BP	GO:0019538	protein metabolic process	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
BP	GO:0043412	macromolecule modification	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
BP	GO:0044267	cellular protein metabolic process	IEP	Enrichment
BP	GO:0070646	protein modification by small protein removal	IEP	Enrichment
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Enrichment
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007871	Methyltransferase_TRM13	174	289
IPR007871	Methyltransferase_TRM13	331	549
IPR022776	TRM13/UPF0224_CHHC_Znf_dom	30	54

External Links

No external refs found!