- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Contig3388.g26497
Description : Leucine Rich Repeat
Gene families : OG_01_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro496_g154670.1 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro1018_g231870.1 | Contig4480.g33669 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1021_g232270.1 | Contig686.g7989 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1104_g241810.1 | Contig4546.g33967 | Leucine Rich Repeat | 0.09 | OrthoFinder | |
| Sro1113_g242620.1 | Contig761.g8636 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1113_g242630.1 | Contig761.g8637 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro1305_g261130.1 | Contig1643.g14827 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro1305_g261140.1 | Contig1643.g14828 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1545_g281350.1 | Contig3310.g25937 | Leucine Rich Repeat | 0.06 | OrthoFinder | |
| Sro1817_g299560.1 | Contig1204.g11343 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro186_g080590.1 | Contig266.g3340 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro186_g080690.1 | Contig266.g3350 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro186_g080700.1 | Contig266.g3351 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro1928_g306040.1 | Contig2945.g23386 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro195_g083180.1 | Contig4576.g34155 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro199_g084530.1 | Contig257.g3191 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro2120_g315390.1 | Contig3476.g26953 | Leucine Rich Repeat | 0.06 | OrthoFinder | |
| Sro2120_g315410.1 | Contig3476.g26955 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro2741_g336020.1 | Contig2869.g22976 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro320_g116580.1 | Contig3665.g28319 | Leucine Rich Repeat | 0.07 | OrthoFinder | |
| Sro365_g127420.1 | Contig3612.g27916 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro425_g140170.2 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro435_g142380.1 | Contig492.g6644 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro537_g162310.1 | Contig1194.g11283 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro614_g175770.1 | Contig1589.g14431 | Leucine Rich Repeat | 0.06 | OrthoFinder | |
| Sro647_g180970.1 | Contig3562.g27513 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro820_g207300.1 | Contig34.g212 | Leucine rich repeat N-terminal domain | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Enrichment |
| MF | GO:0004930 | G protein-coupled receptor activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005576 | extracellular region | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Enrichment |
| MF | GO:0008061 | chitin binding | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009539 | photosystem II reaction center | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| MF | GO:0038023 | signaling receptor activity | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| MF | GO:0060089 | molecular transducer activity | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |