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  5. Sro48_g028180.1

Sro48_g028180.1 (Contig1255.g11713)


Aliases : Contig1255.g11713

Description : GPCR family 3, C-terminal [Interproscan].


Gene families : OG_01_0000512 (OrthoFinder) Phylogenetic Tree(s): OG0000512_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro48_g028180.1
Cluster HCCA: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
Sro222_g091150.1 Contig3134.g24878 Gamma-aminobutyric acid (GABA) B receptor 0.04 OrthoFinder
Sro2781_g336940.1 Contig4651.g34625 Gamma-aminobutyric acid (GABA) B receptor 0.07 OrthoFinder
Sro50_g029180.1 Contig297.g3906 Receptor-type guanylate cyclase gcy 0.04 OrthoFinder
Sro548_g164390.1 Contig1714.g15319 7 transmembrane sweet-taste receptor of 3 GCPR 0.06 OrthoFinder
Sro55_g032260.1 Contig4458.g33500 Receptor-type guanylate cyclase gcy 0.03 OrthoFinder
Sro605_g174200.1 Contig514.g6786 Hypothetical protein 0.04 OrthoFinder
Sro883_g215450.1 Contig421.g5655 Gamma-aminobutyric acid (GABA) B receptor 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004930 G protein-coupled receptor activity IEA Interproscan
BP GO:0007186 G protein-coupled receptor signaling pathway IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
InterPro domains Description Start Stop
IPR017978 GPCR_3_C 514 760
No external refs found!