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  5. Sro458_g147000.1

Sro458_g147000.1 (Contig3230.g25532)


Aliases : Contig3230.g25532

Description : Sensor protein FixL


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro458_g147000.1
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
Cre09.g397050 30781546 No description available 0.02 OrthoFinder
Cre10.g427850 30790464 No description available 0.02 OrthoFinder
Cre10.g429750 30790138 No description available 0.01 OrthoFinder
Dusal.0051s00005.1 33198985 PAS fold [Interproscan]. 0.01 OrthoFinder
Sro448_g145160.1 Contig3664.g28291 Sensor protein FixL 0.05 OrthoFinder
TP04G03620.1 No alias PAS domain; PAS fold [Interproscan]. 0.05 OrthoFinder
TP09G01060.1 No alias PAS domain; PAS fold [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015129 lactate transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015727 lactate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR013767 PAS_fold 246 357
IPR000014 PAS 124 229
No external refs found!