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Aliases : Contig3482.g27001
Description : Leucine Rich Repeat
Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro449_g145310.1 | |
| Cluster | HCCA: Cluster_158 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro101_g051720.1 | Contig348.g4725 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro106_g053670.1 | Contig1122.g10764 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1086_g239740.1 | Contig2506.g20510 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro10_g008370.1 | Contig1.g61 | Leucine rich repeat | 0.03 | OrthoFinder | |
| Sro1236_g255140.1 | Contig1374.g12617 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1331_g263510.1 | Contig1733.g15457 | Leucine rich repeat N-terminal domain | 0.08 | OrthoFinder | |
| Sro1460_g274600.1 | Contig332.g4412 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1468_g275160.1 | Contig3834.g29482 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1543_g281120.1 | Contig1530.g13908 | Hypothetical protein | 0.04 | OrthoFinder | |
| Sro255_g100350.1 | Contig2336.g19212 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro273_g105050.1 | Contig4205.g31986 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro283_g107800.1 | Contig4255.g32211 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro3045_g342740.1 | Contig2560.g20802 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro321_g116720.1 | Contig56.g428 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro322_g117050.1 | Contig1229.g11543 | LRR receptor-like serine threonine-protein kinase | 0.05 | OrthoFinder | |
| Sro32_g020790.1 | Contig3715.g28552 | LRR receptor-like serine threonine-protein kinase At4g08850-like | 0.02 | OrthoFinder | |
| Sro4136_g353110.1 | Contig3023.g24105 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro449_g145320.1 | Contig3482.g27002 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro45_g026870.1 | Contig2311.g19069 | Leucine Rich Repeat | 0.06 | OrthoFinder | |
| Sro460_g147480.1 | Contig3843.g29573 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro52_g030940.1 | Contig3190.g25177 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro548_g164490.1 | Contig1714.g15329 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro558_g166260.1 | Contig3624.g28024 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro573_g168940.1 | Contig1565.g14208 | Fibronectin leucine rich transmembrane protein 2 | 0.03 | OrthoFinder | |
| Sro638_g179650.1 | Contig628.g7628 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro73_g040430.1 | Contig3929.g30144 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro74_g040710.1 | Contig4700.g34933 | Leucine Rich Repeat | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| BP | GO:0006066 | alcohol metabolic process | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0016311 | dephosphorylation | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
| BP | GO:0019751 | polyol metabolic process | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | Enrichment |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
| BP | GO:0046164 | alcohol catabolic process | IEP | Enrichment |
| BP | GO:0046174 | polyol catabolic process | IEP | Enrichment |
| BP | GO:0046434 | organophosphate catabolic process | IEP | Enrichment |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | Enrichment |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Enrichment |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |