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  5. Sro448_g145160.1

Sro448_g145160.1 (Contig3664.g28291)


Aliases : Contig3664.g28291

Description : Sensor protein FixL


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro448_g145160.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000949.36 tig00000949_g5749.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021537.33 tig00021537_g22286.t1 No description available 0.01 OrthoFinder
Cre07.g319650 30775131, FXL4 No description available 0.02 OrthoFinder
Cre10.g427850 30790464 No description available 0.02 OrthoFinder
Cre10.g429750 30790138 No description available 0.02 OrthoFinder
Cre13.g587550 30783866 No description available 0.02 OrthoFinder
Cre17.g708000 30782648, FAP260 No description available 0.02 OrthoFinder
Cz03g29010.t1 No alias PAS domain [Interproscan]. 0.01 OrthoFinder
Dusal.0051s00004.1 33199001 PAS domain [Interproscan]. 0.01 OrthoFinder
Dusal.0065s00022.1 33185844 PAS domain [Interproscan]. 0.02 OrthoFinder
Dusal.0469s00009.1 33191669 PAS domain [Interproscan]. 0.03 OrthoFinder
Dusal.1094s00001.1 33191764 Hypothetical protein 0.01 OrthoFinder
Sro458_g147000.1 Contig3230.g25532 Sensor protein FixL 0.05 OrthoFinder
Vocar.0001s0015.1 32886137 PAS fold [Interproscan]. 0.01 OrthoFinder
Vocar.0002s0204.1 32891156 PAS domain; PAS fold [Interproscan]. 0.03 OrthoFinder
Vocar.0005s0217.1 32883525 PAS domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000086.1_cds_GFH07293.1_1770 HaLaN_02075, GFH07293 PAS domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000217.1_cds_GFH09210.1_3687 HaLaN_04312, GFH09210 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01001107.1_cds_GFH17174.1_11651 HaLaN_13746, GFH17174 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001584.1_cds_GFH20156.1_14633 HaLaN_17235, GFH20156 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01002984.1_cds_GFH25993.1_20470 HaLaN_24060, GFH25993 PAS domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 457 562
IPR013767 PAS_fold 571 681
IPR013767 PAS_fold 326 437
No external refs found!