Aliases : Contig2528.g20654
Description : Complex component RRP43
Gene families : OG_01_0000474 (OrthoFinder) Phylogenetic Tree(s): OG0000474_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro440_g143420.1 | |
Cluster | HCCA: Cluster_302 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020912.53 | tig00020912_g15825.t1 | RNA processing.RNA decay.exosome complex.EXO9 core... | 0.01 | OrthoFinder | |
Cpa|evm.model.tig00021721.20 | tig00021721_g23220.t1 | RNA processing.RNA decay.exosome complex.EXO9 core... | 0.02 | OrthoFinder | |
Cre03.g188200 | 30786998 | No description available | 0.02 | OrthoFinder | |
OT_03G02560.1 | No alias | Exoribonuclease, phosphorolytic domain 1;... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Enrichment |
BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
CC | GO:0005956 | protein kinase CK2 complex | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006605 | protein targeting | IEP | Enrichment |
BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
BP | GO:0008104 | protein localization | IEP | Enrichment |
MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
MF | GO:0019207 | kinase regulator activity | IEP | Enrichment |
MF | GO:0019887 | protein kinase regulator activity | IEP | Enrichment |
BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
BP | GO:0051641 | cellular localization | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001247 | ExoRNase_PH_dom1 | 62 | 185 |
No external refs found! |