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  5. Sro431_g141380.1

Sro431_g141380.1 (Contig2042.g17541)


Aliases : Contig2042.g17541

Description : Laminin G sub domain 2


Gene families : OG_01_0000220 (OrthoFinder) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro431_g141380.1
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
Sro10_g008190.1 Contig1.g43 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder
Sro116_g056940.1 Contig2228.g18470 ECF subfamily RNA polymerase sigma-24 subunit 0.02 OrthoFinder
Sro118_g057670.1 Contig2714.g21837 ECF subfamily RNA polymerase sigma-24 subunit 0.02 OrthoFinder
Sro144_g067110.1 Contig3873.g29810 ECF subfamily RNA polymerase sigma-24 subunit 0.01 OrthoFinder
Sro144_g067150.1 Contig3873.g29814 Domain protein 0.03 OrthoFinder
Sro2294_g322290.1 Contig2191.g18244 ECF subfamily RNA polymerase sigma-24 subunit 0.02 OrthoFinder
Sro2475_g328730.1 Contig3897.g29875 Hypothetical protein 0.04 OrthoFinder
Sro257_g100830.1 Contig2018.g17262 Hypothetical protein 0.04 OrthoFinder
Sro2757_g336340.1 Contig1015.g10160 Pentaxin family 0.04 OrthoFinder
Sro314_g115140.1 Contig2448.g20040 Intercellular signal essential for a variety of... 0.03 OrthoFinder
Sro437_g142830.1 Contig994.g10049 Domain protein 0.01 OrthoFinder
Sro459_g147250.1 Contig4657.g34665 Hypothetical protein 0.04 OrthoFinder
Sro459_g147260.1 Contig4657.g34666 Hypothetical protein 0.05 OrthoFinder
Sro459_g147280.1 Contig4657.g34668 ECF subfamily RNA polymerase sigma-24 subunit 0.03 OrthoFinder
Sro46_g027260.1 Contig1636.g14716 Hypothetical protein 0.05 OrthoFinder
Sro8_g006620.1 Contig89.g975 Intercellular signal essential for a variety of... 0.03 OrthoFinder
Sro8_g006650.2 No alias Hypothetical protein 0.04 OrthoFinder
Sro8_g006730.1 Contig89.g986 ECF subfamily RNA polymerase sigma-24 subunit 0.01 OrthoFinder
Sro950_g223790.1 Contig3704.g28513 Mycoplasma protein of unknown function, DUF285 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR006970 PT 1029 1063
No external refs found!